Refolding Record:
| Protein | |
|---|---|
| Protein Name | Multiple antibiotic resistance protein marA |
| Abbreviated Name | MarA |
| SCOP Family | AraC type transcriptional activator [46759] |
| Structure Notes | |
| Organism | Escherichia coli |
| UniProt Accession | P0ACH5 |
| SCOP Unique ID | n/a |
| Structure Solved | |
| Class | Alpha |
| Molecularity | Monomer |
| Construct | |
|---|---|
| Full Length | y |
| Domain | n/a |
| Chimera | n/a |
| Variants | n/a |
| Chain Length | 127 |
| Molecular Weight | 15184.2 |
| Pi | 9.36 |
| Molecular Weight | 15184.2 |
| Disulphides | Unknown |
| Full Sequence |
MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGESRFLHPLNHYNS
|
| Notes | n/a |
| Expression | |
|---|---|
| Report | Jair KW, Martin RG, Rosner JL, Fujita N, Ishihama A, Wolf RE Jr. (1995) J Bacteriol., 177, 7100-7104 |
| Project Aim | Purification & characterization |
| Fusion | N-terminal hexahistidine tag |
| Protein Expression and Production | Protein recombinantly expressed as and refolded from inclusion bodies. |
| Expression Host | Escherichia coli |
| Expression Strain | BL21(DE3) |
| Expression Temp | 34.0 |
| Expression Time | 3 h |
| Expression Vector | pET15b |
| Expression Protocol | Purification of MarA. Strain N8224 was grown in 2 liters of superbroth at 37􏰝C to an A600 of 0.8. IPTG (isopropyl-􏱇-D-thiogalactopyranoside) was then added to 0.4 mM, and vigorous aeration was continued for 3 h. The remaining steps were carried out in the cold. The cells were harvested by centrifugation (5 g [wet weight]), washed with 25 ml of 50 mM Tris-HCl (pH 7.5)–1 mM EDTA–1 M NaCl, frozen overnight, and resuspended in 25 ml of the bufferVOL. |
| Method of Induction | IPTG |
| Cell Density at Induction | OD 0.8 = 600 |
| Cell Disruption Method | Sonication |
| Lytic Agent | None |
| Pre-Refolding Purification | not specified |
| Solubility | insoluble |
| Refolding | |
|---|---|
| Refolding Method | Dilution |
| Wash Buffer | 25 ml of 50 mM Tris-HCl (pH 7.5)–1 mM EDTA–1 M NaCl |
| Solubilization Buffer | 25 ml of 50 mM Tris-HCl (pH 8.5)–6 M guanidinium-HCl |
| Refolding Buffer | 50 mM Tris-HCl (pH 8.5) |
| Pre-Refolding Purification | not specified |
| Tag Cleaved | no |
| Refolding pH | 8.5 |
| Refolding Temperature | 0.0 |
| Protein Concentration | n/a |
| Refolding Time | n/a |
| Redox Agent | None |
| Redox Agent Concentration | n/a |
| Refolding Protocol | The cells were sonically disrupted with eight 15-s bursts and centrifuged at 120,000 g for 30 min. The supernatant fluid was discarded, the pellet was rinsed with 30 ml of 4 M urea–50 mM Tris-HCl (pH 8.5), and centrifuged again at 120,000 g for 30 min. Finally, the pellet was resuspended in 25 ml of 50 mM Tris-HCl (pH 8.5)–6 M guanidinium-HCl and centrifuged for 30 min at 120,000 g. The resulting solution was diluted to 75 ml with 50 mM Tris-HCl (pH 8.5) and passed through a 100-ml bed volume of chelating Sepharose equilibrated with 0.1 M NiCl2 that had been washed three times with water. The column was eluted with a linear gradient of 0 to 1.0 M imidazole in 1 M NaCl–50 mM Tris-HCl (pH 8.5). A sharp peak of MarA protein eluting at 0.2 M imidazole was collected and extensively dialyzed against buffer A (1 M NaCl–50 mM HEPES [N-2-hydroxyethylpipera- zine-N-2-ethanesulfonic acid; pH 8.0]–1 mM dithiothreitol–5 mM EDTA–0.1 mM Triton X-100). The protein was concentrated with Amicon membranes to 45 ml (0.6 mg/ml) and digested with 500 U of thrombin for 1 h at 0C. The thrombin was removed by benzamidine Sepharose chromatography, and the histidine tag was removed by Sephadex gel filtration, leaving the MarA protein as wild type except for one N-terminal histidine residue from the expression vector. After extensive dialysis against buffer A in dialysis tubing with a molecular weight exclusion of 8,000, the protein was again concentrated with Amicon membranes and finally was dialyzed against buffer A or buffer A supplemented with 20% glycerol. |
| Refolding Assay | SDS-PAGE |
| Refolding Chaperones | None |
| Refolding Additives | None |
| Additives Concentration | n/a |
| Refolding Yield | n/a |
| Purity | n/a |
| Notes | n/a |