Refolding Record:
| Protein | |
|---|---|
| Protein Name | Endostatin |
| Abbreviated Name | EN |
| SCOP Family | Endostatin |
| Structure Notes | |
| Organism | Mouse |
| UniProt Accession | P39061 |
| SCOP Unique ID | n/a |
| Structure Solved | |
| Class | Alpha+Beta |
| Molecularity | Monomer |
| Construct | |
|---|---|
| Full Length | y |
| Domain | n/a |
| Chimera | n/a |
| Variants | n/a |
| Chain Length | 184 |
| Molecular Weight | 20376.0 |
| Pi | 9.09 |
| Molecular Weight | 20376.0 |
| Disulphides | 2 |
| Full Sequence |
HTHQDFQPVLHLVALNTPLSGGMRGIRGADFQCFQQARAVGLSGTFRAFLSSRLQDLYSIVRRADRGSVPIVNLKDEVLSPSWDSLFSGSQGQLQPGARIFSFDGRDVLRHPAWPQKSVWHGSDPSGRRLMESYCETWRTETTGATGQASSLLSGRLLEQKAASCHNSYIVLCIENSFMTSFSK
|
| Notes | n/a |
| Expression | |
|---|---|
| Report | Chura-Chambi RM, Genova LA, Affonso R, Morganti L. (2008) Analytical Biochemistry, 1, Epub ahead of p |
| Project Aim | Protein refolding |
| Fusion | None |
| Protein Expression and Production | Protein recombinantly expressed as and refolded from inclusion bodies. |
| Expression Host | Escherichia coli |
| Expression Strain | BL21(DE3)pLysS |
| Expression Temp | 37.0 |
| Expression Time | 16-h |
| Expression Vector | pET28 |
| Expression Protocol | BL-21(DE3)pLysS was transformed with vector pET-28 containing the DNA sequence coding for the amino acids methionine, alanine, and six histidine residues at the N terminus followed by the sequence of murine ES. For ES expression, a colony was randomly picked from the transformants grown in Kan + LB plates (10 g/L tryptone, 5 g/L yeast extract, 10 g/L NaCl, and 50 mg/L kanamycin) and inoculated into 15 mL of LB medium containing kanamycin. The 15 mL LB overnight culture (37 °C, 280 rpm) was diluted to a final volume of 500 mL of rich culture medium (2 × HKSII) [26], in 1000 mL shaker flasks. Expression of ES was induced with isopropyl-β-D-thiogalactopyranoside (0.5 mM) when the A600 nm reached 3.0. After incubating in the shaker for a 16-h period (37 °C, 280 rpm), bacteria were collected by centrifugation at 2500g for 10 min at 4 °C. The pellet was resuspended in 50 mL of 0.1 M Tris–HCl, pH 7.5, and 5 mM EDTA; lysozyme at a final concentration of 50 μg/mL was added; and the suspension was incubated at room temperature. The suspension was sonicated in the presence of 0.1% sodium deoxycholate, then centrifuged at 8000g for 10 min. |
| Method of Induction | IPTG |
| Cell Density at Induction | OD 3 = 600 |
| Cell Disruption Method | Sonication |
| Lytic Agent | Lysozyme |
| Pre-Refolding Purification | not specified |
| Solubility | insoluble |
| Refolding | |
|---|---|
| Refolding Method | Dilution |
| Wash Buffer | 0.05 M Tris–HCl, pH 7.5 |
| Solubilization Buffer | 0.05 M Tris–HCl, pH 7.5, 100 mM NaCl, 3 M urea |
| Refolding Buffer | 50 mM Tris–HCl pH 7.5, 1 mM EDTA) containing the final concentrations of GdnHCl and oxidized (GSSG) and reduced (GSH) glutathione |
| Pre-Refolding Purification | not specified |
| Tag Cleaved | no tag |
| Refolding pH | 7.5 |
| Refolding Temperature | 0.0 |
| Protein Concentration | n/a |
| Refolding Time | 16 h |
| Redox Agent | GSH/GSSG |
| Redox Agent Concentration | n/a |
| Refolding Protocol | Refolding buffer and sample pressurization The IBs were diluted in refolding buffer (50 mM Tris–HCl pH 7.5, 1 mM EDTA) containing the final concentrations of GdnHCl and oxidized (GSSG) and reduced (GSH) glutathione as indicated in the figures. Samples of 0.5 ml of the suspension were placed into plastic bags, which were vacuum/heat-sealed. The bags were placed in a pressure vessel, with a mixture of water and oil as pressure-transmitting fluid, and high pressure was applied (200 MPa, 2000 bar, or 29,000 psi) for 16 h. Samples were then centrifuged at 12000g for 15 min to remove remaining insoluble aggregates. The supernatant was dialyzed against 50 mM Tris–HCl, pH 7.5, buffer and centrifuged at 12,000g for 15 min to remove insoluble aggregates eventually formed during the dialysis process. |
| Refolding Assay | Unspecified |
| Refolding Chaperones | None |
| Refolding Additives | None |
| Additives Concentration | n/a |
| Refolding Yield | n/a |
| Purity | n/a |
| Notes | n/a |