Refolding Record:
| Protein | |
|---|---|
| Protein Name | Lysophospholipase |
| Abbreviated Name | n/a |
| SCOP Family | Unknown |
| Structure Notes | |
| Organism | Pyrococcus furiosus |
| UniProt Accession | Q8U3I6 |
| SCOP Unique ID | n/a |
| Structure Solved | |
| Class | Unknown |
| Molecularity | Dimer |
| Construct | |
|---|---|
| Full Length | y |
| Domain | n/a |
| Chimera | n/a |
| Variants | n/a |
| Chain Length | 257 |
| Molecular Weight | 28772.3 |
| Pi | 7.2 |
| Molecular Weight | 28772.3 |
| Disulphides | Unknown |
| Full Sequence |
MTQVYKAKFGTPNRGWVIIVHGLGEHSGRYSKLVSMLVNEGYAVYTFDWPGHGKSPGKRGHTSVEEAMEIIDFIIEEINDKPFLFGHSLGGLTVIRYAETRPEKIRGVIASSPALAKSPKTPSFMVALAKILGVLLPSLTLSNGIDPNLLSRNPDAVKRYIEDPLVHDRISAKLGRSIFKNMDLAHREAHKIKVPVLLLVGTGDVITPPEGARKLYGEIKVEDKEIVEFEGAYHEIFEDPEWGEEFHKKIVEWIKKH
|
| Notes | n/a |
| Expression | |
|---|---|
| Report | Chandrayan SK, Dhaunta N, Guptasarma P. (2008) Protein Expression and Purification, 59, 327-33 |
| Project Aim | Protein refolding |
| Fusion | N-terminal +C terminal hexahistidine tag |
| Protein Expression and Production | Protein recombinantly expressed as and refolded from inclusion bodies. |
| Expression Host | Escherichia coli |
| Expression Strain | BL21(DE3)pLysS |
| Expression Temp | 37.0 |
| Expression Time | 3 h |
| Expression Vector | pET23a |
| Expression Protocol | The PCR product was digested with SmaI and SalI enzymes, and first cloned into the multiple cloning site of the vector pGEX-KG (Amersham Biosciences) before it was sub- cloned between the BamHI and XhoI sites of the multiple cloning site of the vector pET23a (Novagen Inc.) for expression. The clone was transformed into E. coli BL21DE3 (pLysS) and the protein was expressed through induction with IPTG (1 mM) after approximately three hours of growth of cells at 37 °C (at an A600 of 0.6–0.8). Cells were harvested after overnight growth in the presence of IPTG. |
| Method of Induction | IPTG |
| Cell Density at Induction | OD 0.6-0.8 = 600 |
| Cell Disruption Method | Not stated |
| Lytic Agent | None |
| Pre-Refolding Purification | Metal affinity chromatography |
| Solubility | partial |
| Refolding | |
|---|---|
| Refolding Method | Dialysis |
| Wash Buffer | n/a |
| Solubilization Buffer | 6 M guanidinium hydrochloride (Gdm HCl) containing 1 M NaCl in 50 mM Tris |
| Refolding Buffer | 20 mM phosphate buffer pH 7 |
| Pre-Refolding Purification | Metal affinity chromatography |
| Tag Cleaved | no |
| Refolding pH | 7.0 |
| Refolding Temperature | 25.0 |
| Protein Concentration | n/a |
| Refolding Time | n/a |
| Redox Agent | None |
| Redox Agent Concentration | n/a |
| Refolding Protocol | Cells were pelleted and resuspended in the presence of 6 M guanidinium hydrochloride (Gdm HCl) containing 1 M NaCl in 50 mM Tris, pH 7.0. After overnight incubation in denaturant, the resuspension was heated to 80 °C for 30 min, and centrifuged to pellet out the cell and membrane debris resulting from cell lysis. The GdmHCl-containing supernatant containing the lysophospholipase was loaded onto a 2.5 ml Ni-NTA affinity column (Sigma–Aldrich) using standard protocols. Following flow-through and washing steps, elution of bound lysophospholipase was carried out sequentially with 8 M urea-containing buffers of pH 5.9, and 4.5. Following elution, the urea was dialyzed out against 20 mM phosphate buffer of pH 7.0, to obtain a mixture of soluble protein and insoluble precipitated protein. The soluble protein was quantified through absorption measurements at 280 nm, using the extinction coefficient predicted for the protein, translating to a concentration of 0.97 mg/ ml for an OD of 1.0 at 280 nm. |
| Refolding Assay | Fluorescence,Activity assay,Circular Dichroism (uv-CD),Thermal melting analyses |
| Refolding Chaperones | None |
| Refolding Additives | None |
| Additives Concentration | n/a |
| Refolding Yield | 0.23 mg/4 g |
| Purity | n/a |
| Notes | n/a |