Refolding Record:
| Protein | |
|---|---|
| Protein Name | Lipase |
| Abbreviated Name | lip4 |
| SCOP Family | Fungal lipases |
| Structure Notes | |
| Organism | Pseudomonas fluorescens |
| UniProt Accession | Q4KJ24 |
| SCOP Unique ID | n/a |
| Structure Solved | |
| Class | Alpha/Beta |
| Molecularity | Monomer |
| Construct | |
|---|---|
| Full Length | y |
| Domain | n/a |
| Chimera | n/a |
| Variants | n/a |
| Chain Length | 296 |
| Molecular Weight | 32427.0 |
| Pi | 9.89 |
| Molecular Weight | 32427.0 |
| Disulphides | Unknown |
| Full Sequence |
MSQELATRYPLVLVPGMLGFVRLLLYPYWYGIIPALRRGGAQVIAVQVSPLNSSEVRGEQLLAQIQRIMAETGAARVNLIGHSQGALTARYAAARRPDWVASVTSVAGPNHGSELADYLQRHSPAHSLRGRVLSLLLRGISSLMRLLETGYRGPKQPVDIHASHQSLTTEGVALFNRQYPQGLPQEWGGQGPAQVDGVHYYSWSGILQPGKTNRGRNLFDGTNRSCRLFARTFVREAGQCDGMVGRYSSHLGQVIGDDYPLDHFDIVNQSLGLVGKGAEPIRLFVEHARRLKAAGL
|
| Notes | n/a |
| Expression | |
|---|---|
| Report | Kim KR, Kwon DY, Yoon SH, Kim WY, Kim KH. (2005) Protein Expression and Purification, 39, 124-129 |
| Project Aim | Purification & characterization |
| Fusion | None |
| Protein Expression and Production | Protein recombinantly expressed as and refolded from inclusion bodies. |
| Expression Host | Escherichia coli |
| Expression Strain | BL21 |
| Expression Temp | 0.0 |
| Expression Time | 00 |
| Expression Vector | pTTY2 |
| Expression Protocol | Bacterial cells expressing PFL were grown according to a previously described method [2] and [11]. The cultured cells (typically 20 g wet weight) were harvested by centrifugation (15 min at 8000g), resuspended in 30 ml of lysis buffer (50 mM Tris–HCl, pH 8.0, and 1 mM EDTA), and lysed by sonication for 1 min in the presence of lysozyme (0.2 mg/ml). Inclusion bodies were separated by centrifugation (30 min 12,000g), and pellets were washed with lysis buffer containing 2% Triton X-100, to remove cell debris and other impurities. |
| Method of Induction | Not Stated |
| Cell Density at Induction | OD n/a = n/a |
| Cell Disruption Method | Sonication |
| Lytic Agent | Lysozyme |
| Pre-Refolding Purification | not specified |
| Solubility | insoluble |
| Refolding | |
|---|---|
| Refolding Method | Column refolding: Size-exclusion chromatography |
| Wash Buffer | 50 mM Tris–HCl, pH 8.0, and 1 mM EDTA, 2% Triton X-100 |
| Solubilization Buffer | 50 mM Tris–HCl, pH 8.0, 8 M urea, and 20 mM β-mercaptoethanol |
| Refolding Buffer | 20 mM Tris–HCl, pH 8.0, and 10 mM CaCl2 |
| Pre-Refolding Purification | not specified |
| Tag Cleaved | no tag |
| Refolding pH | 8.0 |
| Refolding Temperature | 4.0 |
| Protein Concentration | n/a |
| Refolding Time | n/a |
| Redox Agent | None |
| Redox Agent Concentration | n/a |
| Refolding Protocol | Inclusion bodies were separated by centrifugation (30 min 12,000g), and pellets were washed with lysis buffer containing 2% Triton X-100, to remove cell debris and other impurities. Pellets were then resuspended in 10 ml denaturation buffer (50 mM Tris–HCl, pH 8.0, 8 M urea, and 20 mM β-mercaptoethanol), insoluble components were removed by centrifugation (30 min 12,000g), and the supernatant was filtered using a 0.45 μm syringe filter. SEPROS was carried out at 4 °C using refolding buffer (20 mM Tris–HCl, pH 8.0, and 10 mM CaCl2) and a Sephacryl S-200 on Biologic LP system. The solubilized inclusion bodies were applied to the column (2.5 × 75 cm) in 8 M urea (1.5 ml), equilibrated with the refolding buffer, and eluted at 1.5 ml/min. The active fractions from SEPROS were pooled, concentrated, and applied to gel filtration FPLC using a Superdex 200 HR prepacked column. The active fractions were further separated by ion exchange FPLC using a Mono Q prepacked column, and fractions with lipase activity were pooled, concentrated, and subjected to a second gel filtration FPLC using Superdex 200. PFL was also refolded using SEPROS and further purified in the absence of Ca2+, which was used as a control. |
| Refolding Assay | Enzyme activity |
| Refolding Chaperones | None |
| Refolding Additives | None |
| Additives Concentration | n/a |
| Refolding Yield | n/a |
| Purity | n/a |
| Notes | n/a |