Refolding Record:
Protein | |
---|---|
Protein Name | PSC33 (Ara h 6) |
Abbreviated Name | PSC33 (Ara h 6) |
SCOP Family | Seed storage protein, 2S albumin |
Structure Notes | |
Organism | Arachis Hypogaea |
UniProt Accession | Q647G9 |
SCOP Unique ID | n/a |
Structure Solved | |
Class | Alpha |
Molecularity | Monomer |
Construct | |
---|---|
Full Length | y |
Domain | n/a |
Chimera | n/a |
Variants | n/a |
Chain Length | 126 |
Molecular Weight | 14845.6 |
Pi | 5.49102 |
Molecular Weight | 14845.6 |
Disulphides | 5 |
Full Sequence |
MRRERGRQGDSSSCERQVDRVNLKPCEQHIMQRIMGEQE
QYDSYDIRSTRSSDQQQRCCDELNEMENTQRCMCEALQQIMENQCDRLQDRQMVQQFKRE
LMNLPQQCNFRAPQRCDLDVSGGRC
|
Notes | n/a |
Expression | |
---|---|
Report | Clement G, Boquet D, Mondoulet L, Lamourette P, Bernard H, Wal JM (2005) Protein Expression and Purification, 0, epub |
Project Aim | Structure-Function |
Fusion | None |
Protein Expression and Production | Protein recombinantly expressed as and refolded from inclusion bodies. |
Expression Host | Escherichia coli |
Expression Strain | BL21(DE3) |
Expression Temp | 37.0 |
Expression Time | 5 hours |
Expression Vector | pET9c |
Expression Protocol | unknown |
Method of Induction | Not Stated |
Cell Density at Induction | OD = |
Cell Disruption Method | Sonication |
Lytic Agent | None |
Pre-Refolding Purification | None |
Solubility | insoluble |
Refolding | |
---|---|
Refolding Method | Additive-introduced stepwise dialysis |
Wash Buffer | no |
Solubilization Buffer | 0.1 M Tris pH 8, 6 M guanidine-HCl (Gu-HCl), 5 mM DTT. |
Refolding Buffer | Decreasing concentration of urea |
Pre-Refolding Purification | None |
Tag Cleaved | no tag |
Refolding pH | 8.0 |
Refolding Temperature | 4.0 |
Protein Concentration | 13.5 µM |
Refolding Time | 4 days |
Redox Agent | GSH/GSSG |
Redox Agent Concentration | n/a |
Refolding Protocol | Frozen cell pellets were resuspended in 10 ml 0.1 M Tris pH 8 containing a cocktail of protease inhibitors (complete mini, Roche) for 100 ml of bacterial culture. They were sonicated for 45 s at room temperature and centrifuged for 10 min at 12000 g. The inclusion bodies pellet was then resuspended with the same volume ratio in 0.1 M Tris pH 8, 6 M guanidine-HCl (Gu-HCl), 5 mM DTT and rotated for 1-2 h on a rotary mixer. The extract was centrifuged at 12000 g for 10 min and the supernatant was put in a dialysis cassette of MWCO 3500 (Pierce) and submitted to the refolding protocol of Tsumoto et al. [K. Tsumoto, K. Shinoki, H. Kondo, M. Uchikawa, T. Juji, I. Kumagai, Highly efficient recovery of functional single-chain Fv fragments from inclusion bodies overexpressed in Escherichia coli by controlled introduction of oxidizing reagent- application to a human single-chain Fv fragment, J. Immunol. Methods 1998; 219:119-129.]. The concentration of Gu-HCl in the dialysis bath ( 1 l of 0.1 M Tris pH 8, for a 10 ml cassette) was decreased in the following steps: 6 M ? 3 M ? 2 M ? 1 M ? 0.5 M ? 0 M. Step changes were applied overnight for 6 M , overday for 3 M, overnight for 2 M, and so on. Oxidized glutathione (250 µM) and reduced glutathione (500 µM) were added at the 1 M Gu-HCl step and readded with 0.4 M arginine at the 0.5 M Gu-HCl step. Precipitation occurred in the last step but was not due to PSC33. The refolded protein was then applied to a semipreparative (10 x 250 mm) C18 (10 µm 300 ?) reverse phase HPLC column (Vydac) operated at 3 ml/min and 40°C with a Waters 600 pump. Buffer A was 0.1% TFA in water, Buffer B was 100% CH3CN + 0.04% TFA. One min fractions were analyzed by MALDI-TOF, freeze-dried individually, weighed and analyzed by SDS-PAGE, circular dichroism and immunoassay. |
Refolding Assay | Immunoassay |
Refolding Chaperones | None |
Refolding Additives | None |
Additives Concentration | NULL |
Refolding Yield | 30% |
Purity | |
Notes | Synthetic gene |