Refolding Record:
Protein | |
---|---|
Protein Name | Cauliflour mosaic virus capsid protein |
Abbreviated Name | CaMV |
SCOP Family | Unknown |
Structure Notes | |
Organism | Cauliflower Mosaic Virus |
UniProt Accession | Q83168 |
SCOP Unique ID | n/a |
Structure Solved | |
Class | Unknown |
Molecularity | Unknown |
Construct | |
---|---|
Full Length | y |
Domain | n/a |
Chimera | n/a |
Variants | n/a |
Chain Length | 497 |
Molecular Weight | 56705.0 |
Pi | 5.27 |
Molecular Weight | 56705.0 |
Disulphides | Unknown |
Full Sequence |
MAESILDRTINRFWYNLGEDCLSESQFDLMIRLMEESLDGDQIIDLTSLPSDNLQVEPVM
TTTDDSISEEESEFLLAIGETSEDESDSGEEPEFEQVRMDRTGGTEIPKEEDGEPSRYNE
RKRKTTEGRYFPTQPKTIPGQKQTSMGMLNIDCQTNRRTLIDDWAAEIGLIVKTNREDYL
DPETILLLMEHKTSGIPKELIRNTRWNRTTGDIIEQVIDAMYTMFLGLNYSDNKVAEKID
EQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYINQYLSKIPIIGEKALTR
FRHEANGTSIYSLGFAAKIVKEELSKICDLSKKQKKLKKFNKKCCSIGEASAEYGCKKTS
TKKYHKKRYKKKYKVYKPYKKKKKFRSGKYFKPKEKKGSKQKYCPKGKKDCRCWICNIEG
HYANECPNRQSSEKAHILQQAEKLGLQPIEEPYEGVQEVFILEYKEEEEETSTEESDDES
STSEDSDSD
|
Notes | full lenght wildtype protein and a series of delition derivatives were refolded with the same method though different buffers |
Expression | |
---|---|
Report | Chapdelaine Y and Hohn T (1998) Virus Genes, 17, 139-150 |
Project Aim | Assembly |
Fusion | None |
Protein Expression and Production | Protein recombinantly expressed as and refolded from inclusion bodies. |
Expression Host | Escherichia coli |
Expression Strain | BL21(DE3) |
Expression Temp | 37.0 |
Expression Time | 2 h |
Expression Vector | pET3d |
Expression Protocol | Constructs were introduced into Escherichia coli strain BL21 (DE3) by transformation. Liquid cultures were started from several single bacterial colonies in LB medium supplemented with 0.4% glucose and containing 50 mg/ml ampicillin. The cultures were grown to A600 ? 0:6 ÿ 1:0 and expression was induced with 10 mg/ml isoproyl-û-D-thiogalactopyranosid (IPTG) for 2 h at 37 C (22). Cell suspensions were cooled on ice and spun at 5000 g for 15 min. The bacterial pellets were washed and resuspended in lysis buffer (20mM Tris-HCl, pH 7.5, 10mM EDTA, 1mM dithiothreitol (DTT) and 1mM phenylmethylsulfonyl ¯uoride (PMSF, (23)) before being treated with lysozyme (2 mg/ml of culture) for 30 min on ice, and frozen on dry ice. After thawing, lysates were sonicated and spun at 10,000 g for 10 min. |
Method of Induction | IPTG |
Cell Density at Induction | OD 0.6-1.0 = 600 |
Cell Disruption Method | Freeze/Thaw+Sonication |
Lytic Agent | Lysozyme |
Pre-Refolding Purification | Washing inclusion body |
Solubility | insoluble |
Refolding | |
---|---|
Refolding Method | Dialysis |
Wash Buffer | 20mM Tris-HCl, pH 7.5, 10mM EDTA, 1mM DTT ,1 mM phenylmethylsulfonyl fluoride (PMSF) |
Solubilization Buffer | 8M urea |
Refolding Buffer | 20mM Tris-HCl, pH 7.5, 10mM EDTA, 1mM DTT , 0.1mM PMSF , 0.1% Tween-20 |
Pre-Refolding Purification | Washing inclusion body |
Tag Cleaved | no tag |
Refolding pH | 7.5 |
Refolding Temperature | 4.0 |
Protein Concentration | n/a |
Refolding Time | overnight |
Redox Agent | DTT |
Redox Agent Concentration | n/a,1 mM,n/a,n/a,n/a,n/a,n/a,n/a,n/a,1 mM,n/a,n/a,n/a,n/a,n/a,1 mM |
Refolding Protocol | Inclusion body pellets were washed, resolubilized in 8M urea and renatured by dialysis overnight at 4 C against the lysis buffer (containing 0.1mM PMSF and 0.1% Tween-20) OR PBS; 10 mM Na2HPO4 + KH2Po4, 140 mM NaCl, 5.4 mM KCl. After dialysis, samples were clari®ed by centrifugation (10,000 g for 10 min). The supernatant contained between 0.5 to 2 mg/ml of recombinant pIV. Renatured proteins (200 mg) were loaded on the top of 10±60% sucrose gradients and centrifuged at 40,000 rpm in a SW40 rotor for 4 h at 20 C. |
Refolding Assay | Unspecified,SDS-PAGE |
Refolding Chaperones | None |
Refolding Additives | None |
Additives Concentration | n/a |
Refolding Yield | n/a |
Purity | n/a |
Notes | Includes constructs, pIV1-489, 1-454, 1-362, 1-265, 77-489, 77-480, 77-411, 77-362, 77-265, 99-454, 99-265, 99-255. A second buffer was used for refolding pIV77-332, and has another entry in database - PBS; 10 mM Na2HPO4 + KH2PO4, pH 7.3, 140 mM NaCl, 5.4 mM KCl |